BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C09LP1|AL428878
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1679 0.0
>3x_Contig1789
Length = 30977
Score = 1679 bits (847), Expect = 0.0
Identities = 853/855 (99%)
Strand = Plus / Plus
Query: 1 gatcaataccttgctcaatacccttttccgtaccgtcctttttgccactgtcaatgcacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13167 gatcaataccttgctcaatacccttttccgtaccgtcctttttgccactgtcaatgcacg 13226
Query: 61 tttgcttatcctctagcaccttgatctgatgattaaatcggatgttgtttgcaagtaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13227 tttgcttatcctctagcaccttgatctgatgattaaatcggatgttgtttgcaagtaaag 13286
Query: 121 tatctttgttcttgttttgtttccttaattaaaatatgcaaatcacaattttcttttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13287 tatctttgttcttgttttgtttccttaattaaaatatgcaaatcacaattttcttttctc 13346
Query: 181 ctttacttgtcacgtgaggagattgaaacctggaaaaagagtactaaagagggataccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13347 ctttacttgtcacgtgaggagattgaaacctggaaaaagagtactaaagagggataccag 13406
Query: 241 gctacgccgagtatgtcagtaaattcggaaacggcattaatggcggtggtagccaccagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13407 gctacgccgagtatgtcagtaaattcggaaacggcattaatggcggtggtagccaccagg 13466
Query: 301 ttgcaagaatctgccgtattgctgtcagatgacgtgcatatgggacgattatgggcatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13467 ttgcaagaatctgccgtattgctgtcagatgacgtgcatatgggacgattatgggcatca 13526
Query: 361 cgtgacaaaaatcatatcgtccaaaatgacataaatataaacaagcctttgccagcctta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13527 cgtgacaaaaatcatatcgtccaaaatgacataaatataaacaagcctttgccagcttta 13586
Query: 421 aagatgctgggtttgtttacaggtaaacaaacctcttgcaaacataaacaggatgtttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13587 aagatgctgggtttgtttacaggtaaacaaacctcttgcaaacataaacaggatgtttgc 13646
Query: 481 tcatatggctgcctaacacactcaataggtaacgtgcctctctctaatttttgttgcttg 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 13647 tcatatggctgcctaacacactcaataggtaacgtgcctttctctaatttttgttgcttg 13706
Query: 541 ttctgcgtttggtcctatttttgattggctcagtgtttgctagtgctatttttatttgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13707 ttctgcgtttggtcctatttttgattggctcagtgtttgctagtgctatttttatttgcc 13766
Query: 601 ctgtatcatatataaacatgtcgtttctaaaagtgaccagctcttactcctctaatggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13767 ctgtatcatatataaacatgtcgtttctaaaagtgaccagctcttactcctctaatggat 13826
Query: 661 gtacctgttaacaatcaattattctctgcagtgcaaacattacacaaagtcaaataagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13827 gtacctgttaacaatcaattattctctgcagtgcaaacattacacaaagtcaaataagaa 13886
Query: 721 actgtatattgcgaaaattatgactgaattctacagggctccagagatattcagacagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13887 actgtatattgcgaaaattatgactgaattctacagggctccagagatattcagacagaa 13946
Query: 781 cgccatcatcgtcaagaagagtagaagagatattagcgatgacgagaacagtactattgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13947 cgccatcatcgtcaagaagagtagaagagatattagcgatgacgagaacagtactattgt 14006
Query: 841 caggcggaattgcaa 855
|||||||||||||||
Sbjct: 14007 caggcggaattgcaa 14021
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6132
Number of Sequences: 1807
Number of extensions: 6132
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)